Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDM50500.1Sel1 repeat protein; KEGG: cch:Cag_1938 1.1e-21 Sel1-like repeat; COG: COG0790 FOG: TPR repeat, SEL1 subfamily; Psort location: Extracellular, score: 9.55. (314 aa)    
Predicted Functional Partners:
EDM50501.1
Hypothetical protein; KEGG: pfa:MAL13P1.184 0.0023 endopeptidase, putative; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDM52350.1
Putative histidine--tRNA ligase; KEGG: lxx:Lxx17220 1.1e-70 hisS; histidyl-tRNA synthetase K01892; COG: COG0124 Histidyl-tRNA synthetase; Psort location: Cytoplasmic, score: 10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.
    
  0.715
EDM50935.1
SPFH/Band 7/PHB domain protein; KEGG: reh:H16_A2036 3.3e-53 membrane protease subunits, stomatin/prohibitin homologs K01423; Psort location: Cytoplasmic, score: 8.87.
    
 0.548
EDM52451.1
KEGG: rha:RHA1_ro03697 5.6e-05 protein kinase K08884; COG: KOG1181 FOG: Low-complexity; Psort location: Cellwall, score: 9.98.
  
 
 0.505
EDM50503.1
Hypothetical protein; KEGG: ehi:13.t00009 0.00099 phosphatidylinositol-4-phosphate 5-kinase, putative K00889; COG: COG3291 FOG: PKD repeat; Psort location: Cytoplasmic, score: 8.87.
 
     0.490
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
   
 
 0.483
EDM50502.1
Kinase domain protein; KEGG: lin:lin1934 1.2e-31 similar to putative serine/threonine-specific protein kinase K08884; COG: COG2815 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 9.98.
       0.433
tyrS
tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
    
   0.426
ppa
Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
    
   0.422
EDM50498.1
KEGG: fal:FRAAL3746 9.4e-33 putative ABC transporter (ATP-binding protein); COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
       0.401
Your Current Organism:
Eubacterium ventriosum
NCBI taxonomy Id: 411463
Other names: E. ventriosum ATCC 27560, Eubacterium ventriosum ATCC 27560
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