STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM50520.1Hypothetical protein; KEGG: sat:SYN_01735 0.087 4-amino-4-deoxychorismate lyase. (85 aa)    
Predicted Functional Partners:
EDM50519.1
Hypothetical protein; KEGG: pub:SAR11_0490 0.993 pyrF; orotidine 5'-phosphate decarboxylase K01591.
       0.773
EDM50518.1
Hypothetical protein; KEGG: tma:TM0803 0.11 CTP synthetase K01937.
       0.718
EDM50521.1
Hypothetical protein; KEGG: fnu:FN1826 0.67 protease K08303.
       0.518
EDM50522.1
Hypothetical protein; KEGG: ddi:DDB0216394 0.0045 putative histone-like transcription factor K03506.
       0.459
EDM50523.1
Hypothetical protein; KEGG: cac:CAC2128 0.0063 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase K01929.
       0.459
Your Current Organism:
Eubacterium ventriosum
NCBI taxonomy Id: 411463
Other names: E. ventriosum ATCC 27560, Eubacterium ventriosum ATCC 27560
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.