STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM50525.1Hypothetical protein; KEGG: afu:AF1439 0.77 asnB; asparagine synthetase (AsnB) K01953; Psort location: Extracellular, score: 8.82. (52 aa)    
Predicted Functional Partners:
EDM50524.1
Hypothetical protein; KEGG: abo:ABO_1230 0.66 sohB; putative protease SohB K04774; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDM50522.1
Hypothetical protein; KEGG: ddi:DDB0216394 0.0045 putative histone-like transcription factor K03506.
       0.605
EDM50523.1
Hypothetical protein; KEGG: cac:CAC2128 0.0063 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase K01929.
       0.605
EDM50526.1
Hypothetical protein; KEGG: lin:lin0700 0.016 cheA; two-component sensor histidine kinase CheA K03407; Psort location: Cytoplasmic, score: 8.87.
       0.584
EDM50527.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.584
EDM50521.1
Hypothetical protein; KEGG: fnu:FN1826 0.67 protease K08303.
       0.532
Your Current Organism:
Eubacterium ventriosum
NCBI taxonomy Id: 411463
Other names: E. ventriosum ATCC 27560, Eubacterium ventriosum ATCC 27560
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.