STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM50532.1Hypothetical protein; KEGG: mst:Msp_0169 0.24 putative arsenical prump-driving ATPase K01551; COG: COG4974 Site-specific recombinase XerD; Psort location: Cytoplasmic, score: 8.87. (69 aa)    
Predicted Functional Partners:
EDM50956.1
Sigma-70, region 4; KEGG: chu:CHU_3562 0.28 rpoE; RNA polymerase sigma-70 factor, ECF subfamily K00960; COG: NOG16920 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.630
EDM50830.1
Site-specific recombinase, phage integrase family; KEGG: bcl:ABC1027 0.18 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923; COG: COG4974 Site-specific recombinase XerD; Psort location: Cytoplasmic, score: 8.87; Belongs to the 'phage' integrase family.
  
     0.601
EDM50955.1
Hypothetical protein; KEGG: dme:Dmel_CG11963 0.73 CG11963 K01903; COG: NOG21981 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.594
EDM52055.1
KEGG: btl:BALH_3229 0.0027 sigW; RNA polymerase sigma-70 factor, ECF subfamily K00960; COG: NOG16920 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.525
EDM50972.1
Replication initiation factor; KEGG: cyb:CYB_2183 0.65 glycerophosphoryl diester phosphodiesterase family protein K01126; COG: COG2946 Putative phage replication protein RstA; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.517
EDM50533.1
Hypothetical protein; KEGG: bha:BH2782 0.24 exodeoxyribonuclease VII (small subunit) K03602; Psort location: Cytoplasmic, score: 8.87.
       0.453
EDM50534.1
Hypothetical protein; KEGG: osa:4341861 0.011 Os06g0681600 K00430; Psort location: Cytoplasmic, score: 8.87.
       0.453
EDM50957.1
DNA-binding helix-turn-helix protein; KEGG: eba:ebA2762 0.63 boxR; putative regulator of aerobic benzoate metabolic operon containing shikimate kinase-like domain K00891; COG: NOG37851 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
    0.449
EDM52141.1
Class I glutamine amidotransferase; KEGG: fnu:FN0505 2.2e-08 anthranilate synthase component II K01656; COG: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; Psort location: Cytoplasmic, score: 8.87.
  
     0.413
Your Current Organism:
Eubacterium ventriosum
NCBI taxonomy Id: 411463
Other names: E. ventriosum ATCC 27560, Eubacterium ventriosum ATCC 27560
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