STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM50544.1Putative peptidoglycan binding domain protein; KEGG: bli:BL01582 0.0090 blyAB; N-acetylmuramoyl-L-alanine amidase K01447; COG: NOG36567 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (421 aa)    
Predicted Functional Partners:
EDM51779.1
Peptidase, S8/S53 family; KEGG: cpr:CPR_2070 1.2e-80 subtilase family protein; COG: COG1404 Subtilisin-like serine proteases.
 
    0.809
EDM50194.1
Peptidase, S8/S53 family; KEGG: cpf:CPF_2369 1.5e-59 subtilase family protein; COG: COG1404 Subtilisin-like serine proteases; Psort location: Cytoplasmic, score: 8.87.
 
     0.768
EDM50187.1
Hypothetical protein; KEGG: sai:Saci_0691 0.88 rpoA2; DNA-directed RNA polymerase subunit A'' K03042; Psort location: Cytoplasmic, score: 8.87.
  
     0.729
spoIIP
Stage II sporulation protein P; KEGG: wbr:WGLp018 0.042 surA; parvulin-like peptidyl-prolyl isomerase K03771; COG: NOG13213 non supervised orthologous group.
  
   
 0.684
EDM52148.1
LysM domain protein; KEGG: pfa:PF14_0112 5.9e-08 POM1, putative K00961; COG: NOG36013 non supervised orthologous group.
 
   
 0.652
EDM50649.1
Hypothetical protein; KEGG: hhe:HH0618 0.18 lysC; aspartate kinase K00928.
  
     0.631
EDM50648.1
LysM domain protein; KEGG: fnu:FN0522 0.0022 exonuclease SBCC K03546; COG: COG1388 FOG: LysM repeat; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.628
EDM50174.1
Single-strand binding family protein; KEGG: tma:TM0264 0.996 16S pseudouridylate synthase K06183; COG: COG0629 Single-stranded DNA-binding protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.605
EDM52320.1
Hypothetical protein; KEGG: gga:395456 0.079 PCSK5, PC6; proprotein convertase subtilisin/kexin type 5 K08654; COG: NOG16856 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.604
EDM50651.1
Spore coat protein, CotS family; KEGG: cal:orf19.1648 3.4e-05 RAD50; DNA repair protein K01553; COG: NOG09979 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.599
Your Current Organism:
Eubacterium ventriosum
NCBI taxonomy Id: 411463
Other names: E. ventriosum ATCC 27560, Eubacterium ventriosum ATCC 27560
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