STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN02029.1KEGG: sth:STH1782 3.2e-103 sugar ABC transportor ATP-binding protein K05816; COG: COG3839 ABC-type sugar transport systems, ATPase components; Psort location: CytoplasmicMembrane, score:9.59; Belongs to the ABC transporter superfamily. (373 aa)    
Predicted Functional Partners:
EDN00675.1
KEGG: cya:CYA_1846 0.00077 modB; molybdate ABC transporter, permease protein K02018; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.986
EDN01999.1
KEGG: ava:Ava_0243 0.0080 molybdate ABC transporter, permease protein K02018; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.985
EDN00695.1
COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.985
EDN00751.1
KEGG: ava:Ava_0243 0.00055 molybdate ABC transporter, permease protein K02018; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.985
EDN01116.1
ABC transporter, permease protein; KEGG: baa:BA_0884 0.00065 binding-protein-dependent transport systems inner membrane component K00294; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.984
EDN00752.1
ABC transporter, permease protein; KEGG: hpa:HPAG1_0451 3.4e-05 molybdenum ABC transporter ModB K06022; COG: COG0395 ABC-type sugar transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.981
EDN00676.1
KEGG: ava:Ava_0243 0.00018 molybdate ABC transporter, permease protein K02018; COG: COG0395 ABC-type sugar transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 0.980
EDN01998.1
COG: COG0395 ABC-type sugar transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.979
EDN00696.1
ABC transporter, permease protein; KEGG: cdi:DIP0495 0.0091 putative molybdenum ABC transport system (integral membrane and ATP-binding proteins) K02017:K02018; COG: COG0395 ABC-type sugar transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.979
EDN01115.1
KEGG: cya:CYA_1846 0.00045 modB; molybdate ABC transporter, permease protein K02018; COG: COG0395 ABC-type sugar transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.977
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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