STRINGSTRING
BACCAP_00176 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00176" - Topology modulation protein in Pseudoflavonifractor capillosus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00176Topology modulation protein (175 aa)    
Predicted Functional Partners:
rpoA
Transcriptase subunit alpha ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (315 aa)
   
 
  0.912
BACCAP_00175
PP-loop family protein (257 aa)
   
   
  0.872
rpmJ
50S ribosomal protein L36 (37 aa)
   
   
  0.863
BACCAP_01209
Hydrolase, NUDIX family (158 aa)
 
  0.855
rplX
50S ribosomal protein L24 ; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit (105 aa)
   
   
  0.850
rpoC
Transcriptase subunit beta’ ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1249 aa)
   
  0.846
BACCAP_03225
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1101 aa)
   
  0.846
BACCAP_00174
Uncharacterized protein (34 aa)
              0.845
rplO
50S ribosomal protein L15 ; Binds to the 23S rRNA (146 aa)
   
   
  0.844
nadE
NAD+ synthase (641 aa)
   
  0.832
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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