STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN01852.1Hypothetical protein; COG: NOG21603 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96. (86 aa)    
Predicted Functional Partners:
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
   
   0.808
EDN01849.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
       0.804
EDN01853.1
Radical SAM domain protein; KEGG: dps:DP0065 3.4e-06 pflA; related to pyruvate formate-lyase activating enzyme K04069; COG: COG0535 Predicted Fe-S oxidoreductases; Psort location: Cytoplasmic, score:8.96.
       0.775
EDN01851.1
Ser/Thr phosphatase family protein; KEGG: lwe:lwe2128 4.2e-30 phosphohydrolase, putative; COG: COG1408 Predicted phosphohydrolases.
       0.773
EDN01854.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
       0.770
EDN01850.1
Hypothetical protein; COG: NOG21821 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
       0.754
EDN01848.1
Bacterial sugar transferase; KEGG: aba:Acid345_3821 2.0e-32 undecaprenyl-phosphate galactosephosphotransferase K00996; COG: COG2148 Sugar transferases involved in lipopolysaccharide synthesis; Psort location: CytoplasmicMembrane, score:9.97.
       0.707
EDN01846.1
Hypothetical protein; COG: NOG17531 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:10.00.
       0.698
EDN01847.1
Glycosyltransferase, group 1 family protein; KEGG: lsl:LSL_0991 4.7e-70 rfaG; glycosyltransferase K00754; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score:8.96.
       0.698
EDN01855.1
Hypothetical protein.
       0.570
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.