STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN01854.1Hypothetical protein; Psort location: Cytoplasmic, score:8.96. (281 aa)    
Predicted Functional Partners:
EDN01850.1
Hypothetical protein; COG: NOG21821 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
     0.940
EDN01853.1
Radical SAM domain protein; KEGG: dps:DP0065 3.4e-06 pflA; related to pyruvate formate-lyase activating enzyme K04069; COG: COG0535 Predicted Fe-S oxidoreductases; Psort location: Cytoplasmic, score:8.96.
 
     0.940
EDN01847.1
Glycosyltransferase, group 1 family protein; KEGG: lsl:LSL_0991 4.7e-70 rfaG; glycosyltransferase K00754; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score:8.96.
 
     0.879
EDN01856.1
Glycosyl hydrolase family 20, catalytic domain protein; KEGG: spd:SPD_0063 9.7e-40 strH; beta-N-acetylhexosaminidase K01207; COG: COG3525 N-acetyl-beta-hexosaminidase.
 
     0.874
EDN01851.1
Ser/Thr phosphatase family protein; KEGG: lwe:lwe2128 4.2e-30 phosphohydrolase, putative; COG: COG1408 Predicted phosphohydrolases.
 
     0.836
EDN01840.1
Chain length determinant protein; KEGG: cch:Cag_0649 2.2e-28 uncharacterized protein involved in exopolysaccharide biosynthesis-like K00903; COG: COG0489 ATPases involved in chromosome partitioning; Psort location: CytoplasmicMembrane, score:9.82.
 
 
   0.833
EDN01839.1
Chain length determinant protein; KEGG: nca:Noca_4185 4.6e-40 lipopolysaccharide biosynthesis; COG: COG3944 Capsular polysaccharide biosynthesis protein.
 
 
   0.831
EDN01841.1
Hypothetical protein; KEGG: bce:BC2506 3.1e-16 bacillolysin K01400; COG: NOG16062 non supervised orthologous group.
 
     0.824
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
   
   0.808
EDN01859.1
KEGG: pen:PSEEN2819 9.4e-49 ABC efflux transporter, permease/ATP-binding protein; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
     0.777
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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