STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN01870.1Carbohydrate kinase, FGGY family protein; KEGG: bcl:ABC0374 8.4e-96 rhamnulokinase and L-rhamnose isomerase K00848:K01813; COG: COG1070 Sugar (pentulose and hexulose) kinases. (438 aa)    
Predicted Functional Partners:
rhaA
KEGG: oih:OB0496 7.2e-122 L-rhamnose isomerase K01813; COG: COG4806 L-rhamnose isomerase; Belongs to the rhamnose isomerase family.
 
 0.999
rhaD
Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde.
 
 0.997
EDN01868.1
Alpha-L-rhamnosidase N-terminal domain protein; KEGG: bcz:BCZK2019 5.2e-135 ramA; alfa-L-rhamnosidase; COG: NOG04002 non supervised orthologous group.
 
  
 0.925
xylB
Xylulokinase; KEGG: cac:CAC2612 8.6e-142 xylB; xylulose kinase K00854; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score:8.96.
  
  
 
0.829
EDN01869.1
Hypothetical protein; KEGG: eci:UTI89_C4210 1.5e-14 yicJ; hypothetical symporter YicJ K03292; COG: COG2211 Na+/melibiose symporter and related transporters; Psort location: CytoplasmicMembrane, score:10.00.
  
  
 0.810
EDM98416.1
KEGG: spk:MGAS9429_Spy0155 6.2e-84 araD; L-ribulose-5-phosphate 4-epimerase K01786; COG: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; Psort location: Cytoplasmic, score:8.96.
  
 
 0.807
fucO
Lactaldehyde reductase; KEGG: cpf:CPF_1046 9.8e-141 fucO; lactaldehyde reductase K00048; COG: COG1454 Alcohol dehydrogenase, class IV; Psort location: Cytoplasmic, score:9.26.
 
   
 0.685
EDN00740.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
 
    0.625
EDM98430.1
AP endonuclease, family 2; COG: COG1082 Sugar phosphate isomerases/epimerases; Psort location: Cytoplasmic, score:8.96.
 
 
 0.607
rpe
KEGG: gka:GK1178 1.1e-54 ribulose-phosphate 3-epimerase K01783; COG: COG0036 Pentose-5-phosphate-3-epimerase; Psort location: Cytoplasmic, score:8.96.
    
 0.599
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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