STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mgsAMethylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. (160 aa)    
Predicted Functional Partners:
gltA
KEGG: gka:GK1431 0. glutamate synthaselarge subunit K00265; COG: COG0069 Glutamate synthase domain 2; Psort location: Cytoplasmic, score:8.96.
    
  0.828
EDN01836.1
Alcohol dehydrogenase, iron-dependent; KEGG: cno:NT01CX_0287 1.2e-121 glycerol dehydrogenase CgrD K00005; COG: COG0371 Glycerol dehydrogenase and related enzymes; Psort location: Cytoplasmic, score:9.97.
     
 0.798
EDN02018.1
Oxidoreductase, aldo/keto reductase family protein; KEGG: lsa:LSA0238 3.5e-74 putative aldo/keto reductase (oxidoreductase) K00100; COG: COG0656 Aldo/keto reductases, related to diketogulonate reductase.
     
 0.788
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
  
 0.721
EDN01909.1
Hypothetical protein; KEGG: reh:H16_A0304 2.0e-64 asmT; putative acetylserotonin O-methyltransferase K00543; COG: COG1092 Predicted SAM-dependent methyltransferases; Psort location: Cytoplasmic, score:8.96.
       0.675
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
  
    0.675
cca
KEGG: ctc:CTC01205 1.1e-57 tRNA nucleotidyltransferase (CCA-adding enzyme) K00974; COG: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; Psort location: Cytoplasmic, score:8.96.
  
  
 0.642
EDM97706.1
HDIG domain protein; KEGG: ctc:CTC01205 6.5e-73 tRNA nucleotidyltransferase (CCA-adding enzyme) K00974; COG: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; Psort location: Cytoplasmic, score:8.96.
  
  
 0.642
EDN01911.1
Resolvase, N-terminal domain protein; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs; Psort location: Cytoplasmic, score:8.96.
       0.511
EDN01912.1
Hypothetical protein.
       0.511
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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