STRINGSTRING
mgsA protein (Pseudoflavonifractor capillosus) - STRING interaction network
"mgsA" - Methylglyoxal synthase in Pseudoflavonifractor capillosus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mgsAMethylglyoxal synthase (160 aa)    
Predicted Functional Partners:
BACCAP_00177
Alcohol dehydrogenase, iron-dependent (363 aa)
     
 
  0.789
BACCAP_00253
Uncharacterized protein (400 aa)
              0.750
BACCAP_04033
Alcohol dehydrogenase, iron-dependent (393 aa)
         
  0.649
coaD
Pantetheine-phosphate adenylyltransferase ; Reversibly transfers an adenylyl group from ATP to 4’- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate (165 aa)
       
    0.647
BACCAP_00804
Uncharacterized protein (284 aa)
         
  0.630
BACCAP_00256
Uncharacterized protein (50 aa)
              0.573
BACCAP_00255
Resolvase, N-terminal domain protein (483 aa)
              0.573
BACCAP_00252
Uncharacterized protein (45 aa)
              0.550
dpaB
Dipicolinic acid synthetase, B subunit (193 aa)
              0.550
BACCAP_00892
Glycosyltransferase, group 1 family protein (382 aa)
         
  0.453
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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