STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN01923.1Flavocytochrome c; KEGG: fnu:FN0050 2.1e-108 fumarate reductase flavoprotein subunit K00244; COG: COG3976 Uncharacterized protein conserved in bacteria; Psort location: Periplasmic, score:9.76. (634 aa)    
Predicted Functional Partners:
cinA
Competence/damage-inducible domain protein CinA; KEGG: mmu:319945 5.5e-07 Flad1; RFad1, flavin adenine dinucleotide synthetase, homolog (yeast) K00953; COG: COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Psort location: Cytoplasmic, score:8.96; Belongs to the CinA family.
     
 0.860
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
    
 0.855
EDM99427.1
FMN-binding domain protein; KEGG: lac:LBA1411 4.6e-53 fumarate reductase flavoprotein subunit K00238; COG: COG3976 Uncharacterized protein conserved in bacteria.
 
  
 
0.855
EDM97715.1
FMN-binding domain protein; KEGG: lac:LBA1411 5.6e-186 fumarate reductase flavoprotein subunit K00238; COG: COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
 
  
 
0.854
EDN02037.1
FMN-binding domain protein; KEGG: lpl:lp_0952 9.1e-06 fumarate reductase, flavoprotein subunit precursor K00238; COG: COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
 
  
 
0.852
EDN00595.1
Hypothetical protein; KEGG: ctc:CTC00811 7.8e-48 fumarate reductase flavoprotein subunit precursor K00244; COG: COG3976 Uncharacterized protein conserved in bacteria; Psort location: Periplasmic, score:9.76.
 
  
 
0.850
EDN01996.1
FAD binding domain protein; KEGG: ctc:CTC00811 5.0e-66 fumarate reductase flavoprotein subunit precursor K00244; COG: COG3976 Uncharacterized protein conserved in bacteria; Psort location: Periplasmic, score:9.44.
 
  
 
0.847
EDN01146.1
FAD binding domain protein; KEGG: ctc:CTC00811 2.9e-54 fumarate reductase flavoprotein subunit precursor K00244; COG: COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Psort location: Periplasmic, score:9.76.
 
  
 
0.847
EDM99672.1
FAD binding domain protein; KEGG: ctc:CTC01847 1.1e-57 fumarate reductase flavoprotein subunit K00244; COG: COG3976 Uncharacterized protein conserved in bacteria; Psort location: Periplasmic, score:9.76.
 
  
 
0.846
EDM97956.1
KEGG: ctc:CTC00811 1.7e-56 fumarate reductase flavoprotein subunit precursor K00244; COG: COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Psort location: Periplasmic, score:9.76.
 
  
 
0.845
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.