rpsT protein (Pseudoflavonifractor capillosus)

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rpsT

Ribosomal protein S20; Binds directly to 16S ribosomal RNA. (90 aa)

Predicted Functional Partners:

rplM

0.996

rplU

0.996

rpmB

0.996

rpsI

0.992

rpmH

0.992

rpmA

0.992

rpsO

0.992

rpsP

0.992

rpsU

0.992

rpmE

0.992

Your Current Organism:

Pseudoflavonifractor capillosus

NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplU	BACCAP_00173	BACCAP_00752	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.996
rplM	rpmA	BACCAP_00173	BACCAP_00750	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG: COG0211 Ribosomal protein L27; Psort location: Cytoplasmic, score:8.96; Belongs to the bacterial ribosomal protein bL27 family.	0.998
rplM	rpmB	BACCAP_00173	BACCAP_02079	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG: COG0227 Ribosomal protein L28; Psort location: Cytoplasmic, score:8.96; Belongs to the bacterial ribosomal protein bL28 family.	0.996
rplM	rpmE	BACCAP_00173	BACCAP_02358	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L31; Binds the 23S rRNA.	0.992
rplM	rpmH	BACCAP_00173	BACCAP_00406	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG: COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.991
rplM	rpsI	BACCAP_00173	BACCAP_00172	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG: COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsO	BACCAP_00173	BACCAP_01346	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.997
rplM	rpsP	BACCAP_00173	BACCAP_02088	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG: COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.997
rplM	rpsT	BACCAP_00173	BACCAP_00431	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.996
rplM	rpsU	BACCAP_00173	BACCAP_02302	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG: COG0828 Ribosomal protein S21; Psort location: Cytoplasmic, score:8.96; Belongs to the bacterial ribosomal protein bS21 family.	0.993
rplU	rplM	BACCAP_00752	BACCAP_00173	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.996
rplU	rpmA	BACCAP_00752	BACCAP_00750	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG: COG0211 Ribosomal protein L27; Psort location: Cytoplasmic, score:8.96; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplU	rpmB	BACCAP_00752	BACCAP_02079	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG: COG0227 Ribosomal protein L28; Psort location: Cytoplasmic, score:8.96; Belongs to the bacterial ribosomal protein bL28 family.	0.996
rplU	rpmE	BACCAP_00752	BACCAP_02358	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L31; Binds the 23S rRNA.	0.992
rplU	rpmH	BACCAP_00752	BACCAP_00406	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG: COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.991
rplU	rpsI	BACCAP_00752	BACCAP_00172	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG: COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.997
rplU	rpsO	BACCAP_00752	BACCAP_01346	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.991
rplU	rpsP	BACCAP_00752	BACCAP_02088	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG: COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.996
rplU	rpsT	BACCAP_00752	BACCAP_00431	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.996
rplU	rpsU	BACCAP_00752	BACCAP_02302	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG: COG0828 Ribosomal protein S21; Psort location: Cytoplasmic, score:8.96; Belongs to the bacterial ribosomal protein bS21 family.	0.995

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