Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM98501.1 | EDN01800.1 | BACCAP_03303 | BACCAP_00465 | HD domain protein; KEGG: ava:Ava_1777 1.3e-20 metal dependent phosphohydrolase, HD region with response regulator receiver modulation K07814; COG: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; Psort location: Cytoplasmic, score:8.96. | Radical SAM domain protein; COG: COG0535 Predicted Fe-S oxidoreductases; Psort location: Cytoplasmic, score:8.96. | 0.584 |
EDN01799.1 | EDN01800.1 | BACCAP_00464 | BACCAP_00465 | Hypothetical protein. | Radical SAM domain protein; COG: COG0535 Predicted Fe-S oxidoreductases; Psort location: Cytoplasmic, score:8.96. | 0.572 |
EDN01799.1 | EDN01801.1 | BACCAP_00464 | BACCAP_00466 | Hypothetical protein. | Hypothetical protein; COG: COG3481 Predicted HD-superfamily hydrolase. | 0.556 |
EDN01799.1 | EDN01802.1 | BACCAP_00464 | BACCAP_00467 | Hypothetical protein. | MATE efflux family protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score:10.00. | 0.556 |
EDN01800.1 | EDM98501.1 | BACCAP_00465 | BACCAP_03303 | Radical SAM domain protein; COG: COG0535 Predicted Fe-S oxidoreductases; Psort location: Cytoplasmic, score:8.96. | HD domain protein; KEGG: ava:Ava_1777 1.3e-20 metal dependent phosphohydrolase, HD region with response regulator receiver modulation K07814; COG: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; Psort location: Cytoplasmic, score:8.96. | 0.584 |
EDN01800.1 | EDN01799.1 | BACCAP_00465 | BACCAP_00464 | Radical SAM domain protein; COG: COG0535 Predicted Fe-S oxidoreductases; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein. | 0.572 |
EDN01800.1 | EDN01801.1 | BACCAP_00465 | BACCAP_00466 | Radical SAM domain protein; COG: COG0535 Predicted Fe-S oxidoreductases; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; COG: COG3481 Predicted HD-superfamily hydrolase. | 0.423 |
EDN01800.1 | EDN01802.1 | BACCAP_00465 | BACCAP_00467 | Radical SAM domain protein; COG: COG0535 Predicted Fe-S oxidoreductases; Psort location: Cytoplasmic, score:8.96. | MATE efflux family protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score:10.00. | 0.423 |
EDN01801.1 | EDN01799.1 | BACCAP_00466 | BACCAP_00464 | Hypothetical protein; COG: COG3481 Predicted HD-superfamily hydrolase. | Hypothetical protein. | 0.556 |
EDN01801.1 | EDN01800.1 | BACCAP_00466 | BACCAP_00465 | Hypothetical protein; COG: COG3481 Predicted HD-superfamily hydrolase. | Radical SAM domain protein; COG: COG0535 Predicted Fe-S oxidoreductases; Psort location: Cytoplasmic, score:8.96. | 0.423 |
EDN01801.1 | EDN01802.1 | BACCAP_00466 | BACCAP_00467 | Hypothetical protein; COG: COG3481 Predicted HD-superfamily hydrolase. | MATE efflux family protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score:10.00. | 0.773 |
EDN01802.1 | EDN01799.1 | BACCAP_00467 | BACCAP_00464 | MATE efflux family protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score:10.00. | Hypothetical protein. | 0.556 |
EDN01802.1 | EDN01800.1 | BACCAP_00467 | BACCAP_00465 | MATE efflux family protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score:10.00. | Radical SAM domain protein; COG: COG0535 Predicted Fe-S oxidoreductases; Psort location: Cytoplasmic, score:8.96. | 0.423 |
EDN01802.1 | EDN01801.1 | BACCAP_00467 | BACCAP_00466 | MATE efflux family protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score:10.00. | Hypothetical protein; COG: COG3481 Predicted HD-superfamily hydrolase. | 0.773 |