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BACCAP_00475 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00475" - Putative GTP-binding protein TypA in Pseudoflavonifractor capillosus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00475Putative GTP-binding protein TypA (262 aa)    
Predicted Functional Partners:
BACCAP_00476
Putative GTP-binding protein TypA (343 aa)
          0.996
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase ; Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) (649 aa)
   
 
  0.744
tuf
Elongation factor Tu ; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (400 aa)
 
 
   
  0.696
rpsI
30S ribosomal protein S9 (134 aa)
   
   
  0.670
BACCAP_00473
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (304 aa)
   
 
  0.648
BACCAP_00477
Uncharacterized protein (46 aa)
              0.609
fusA
Elongation factor G ; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (702 aa)
 
 
   
  0.601
BACCAP_02380
Translation elongation factor G (690 aa)
     
   
  0.601
BACCAP_03333
S1 RNA binding domain protein (519 aa)
   
 
  0.582
BACCAP_03298
S1 RNA binding domain protein (509 aa)
   
 
  0.582
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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