STRINGSTRING
BACCAP_00546 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00546" - Uncharacterized protein in Pseudoflavonifractor capillosus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00546Uncharacterized protein (429 aa)    
Predicted Functional Partners:
BACCAP_00900
Glutamate synthase [NADPH], large subunit (1551 aa)
   
   
  0.858
BACCAP_00582
Oxidoreductase, short chain dehydrogenase/reductase family protein (245 aa)
 
 
    0.702
BACCAP_00940
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (513 aa)
   
 
    0.675
BACCAP_03626
Putative 5-methyltetrahydrofolate--homocysteine methyltransferase (799 aa)
       
    0.663
guaB
Inosine-5’-monophosphate dehydrogenase (491 aa)
   
 
    0.649
fabG
3-oxoacyl-[acyl-carrier-protein] reductase (247 aa)
   
 
    0.638
era
GTPase Era ; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism (297 aa)
 
        0.584
rpmA
50S ribosomal protein L27 (94 aa)
   
      0.553
BACCAP_00548
Uncharacterized protein (399 aa)
              0.514
BACCAP_00547
Uncharacterized protein (41 aa)
              0.514
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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