STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN01425.1Lipid kinase, YegS/Rv2252/BmrU family; KEGG: gvi:gll3519 1.8e-08 putative methylglyoxal synthase K01734; COG: COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase. (320 aa)    
Predicted Functional Partners:
groL
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
    
  0.982
EDN01424.1
Hypothetical protein; KEGG: bce:BC3257 2.5e-05 N-acetylmuramoyl-L-alanine amidase K01447; COG: NOG10763 non supervised orthologous group.
       0.714
cdsA
Phosphatidate cytidylyltransferase; KEGG: tte:TTE1403 8.2e-34 cdsA; CDP-diglyceride synthetase K00981; COG: COG0575 CDP-diglyceride synthetase; Psort location: CytoplasmicMembrane, score:10.00.
    
 0.679
EDN01426.1
Hypothetical protein.
       0.671
EDN00108.1
Acyltransferase; KEGG: chy:CHY_1926 2.9e-22 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655; COG: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; Psort location: Cytoplasmic, score:8.96.
    
 0.664
EDN01423.1
Hypothetical protein; KEGG: bcz:BCZK1441 5.7e-81 methyltransferase K00599; COG: COG0116 Predicted N6-adenine-specific DNA methylase; Belongs to the methyltransferase superfamily.
       0.634
EDN01422.1
Hypothetical protein.
       0.621
groS
Chaperonin GroS; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
       0.527
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
    0.495
gltA
KEGG: gka:GK1431 0. glutamate synthaselarge subunit K00265; COG: COG0069 Glutamate synthase domain 2; Psort location: Cytoplasmic, score:8.96.
 
  
 0.471
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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