STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN01467.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: vvy:VV1603 2.3e-06 citA; putative sensor kinase CitA K07700; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: CytoplasmicMembrane, score:10.00. (428 aa)    
Predicted Functional Partners:
EDN01469.1
KEGG: ava:Ava_2562 7.6e-07 response regulator receiver signal transduction histidine kinase; COG: COG3279 Response regulator of the LytR/AlgR family.
 
  
  0.946
EDN01465.1
Glycosyl hydrolase family 3 N-terminal domain protein; KEGG: tma:TM0025 1.0e-35 beta-glucosidase K05349; COG: COG1472 Beta-glucosidase-related glycosidases; Psort location: CytoplasmicMembrane, score:9.50.
 
    0.899
EDN00352.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ssp:SSP0840 2.8e-07 accessory gene regulator C K07706; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: Cytoplasmic, score:8.96.
  
  
  0.786
EDM97351.1
LytTr DNA-binding domain protein; COG: COG3279 Response regulator of the LytR/AlgR family; Psort location: Cytoplasmic, score:8.96.
  
  
  0.784
EDM97801.1
Hypothetical protein; KEGG: rru:Rru_A0376 1.6e-10 transcriptional regulator, LytR/AlgR family K07705; COG: COG3279 Response regulator of the LytR/AlgR family; Psort location: Cytoplasmic, score:8.96.
  
  
  0.781
EDM98694.1
LytTr DNA-binding domain protein; KEGG: chu:CHU_2785 9.1e-06 rcsC; sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB; COG: COG3279 Response regulator of the LytR/AlgR family; Psort location: Cytoplasmic, score:8.96.
  
  
  0.780
EDM97522.1
LytTr DNA-binding domain protein; KEGG: rru:Rru_A0376 1.1e-08 transcriptional regulator, LytR/AlgR family K07705; COG: COG3279 Response regulator of the LytR/AlgR family; Psort location: Cytoplasmic, score:8.96.
  
  
  0.779
EDM98796.1
Response regulator receiver domain protein; KEGG: rru:Rru_A0376 7.1e-09 transcriptional regulator, LytR/AlgR family K07705; COG: COG3279 Response regulator of the LytR/AlgR family; Psort location: Cytoplasmic, score:8.96.
  
  
  0.777
EDM97793.1
DNA-binding response regulator family protein; KEGG: bme:BMEII0050 3.9e-07 sensory transduction histidine kinase; COG: COG3279 Response regulator of the LytR/AlgR family; Psort location: Cytoplasmic, score:8.96.
  
  
  0.777
EDM98421.1
LytTr DNA-binding domain protein; KEGG: bur:Bcep18194_A5728 1.5e-06 two component transcriptional regulator, winged helix family; COG: COG3279 Response regulator of the LytR/AlgR family; Psort location: Cytoplasmic, score:8.96.
  
  
  0.769
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.