STRINGSTRING
BACCAP_00621 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00621" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00621Uncharacterized protein (378 aa)    
Predicted Functional Partners:
BACCAP_04224
Uncharacterized protein (268 aa)
   
          0.638
BACCAP_00622
Transcriptional regulator, MarR family (144 aa)
              0.582
BACCAP_04864
Uncharacterized protein (216 aa)
   
          0.565
BACCAP_03924
TQXA domain protein (1725 aa)
   
          0.553
BACCAP_01328
Uncharacterized protein (418 aa)
   
          0.551
atpE
V-ATPase subunit E ; Produces ATP from ADP in the presence of a proton gradient across the membrane (228 aa)
 
          0.550
BACCAP_02333
Putative sporulation protein YqfC (96 aa)
   
          0.548
BACCAP_02002
LysM domain protein (505 aa)
   
          0.524
BACCAP_01764
Cna protein B-type domain protein (2025 aa)
   
          0.496
BACCAP_00891
O-antigen polymerase (526 aa)
   
          0.491
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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