STRINGSTRING
BACCAP_00813 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00813" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00813Uncharacterized protein (449 aa)    
Predicted Functional Partners:
BACCAP_00812
Transcriptional regulator, PadR family (183 aa)
              0.863
BACCAP_04861
Methyltransferase domain protein (244 aa)
     
    0.670
BACCAP_04180
Methyltransferase domain protein (231 aa)
     
    0.670
BACCAP_02153
Methyltransferase domain protein (189 aa)
     
    0.670
BACCAP_01860
Methyltransferase domain protein (255 aa)
     
    0.670
BACCAP_01289
Methyltransferase domain protein (273 aa)
     
    0.670
BACCAP_01193
Methyltransferase domain protein (249 aa)
     
    0.670
BACCAP_02297
Putative ubiquinone/menaquinone biosynthesis methyltransferase (235 aa)
   
 
    0.648
BACCAP_01513
NAD dependent epimerase/dehydratase family protein (282 aa)
   
 
  0.643
BACCAP_03770
Putative F420-dependent oxidoreductase, Rv2161c family (339 aa)
         
  0.632
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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