STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN01245.1Hypothetical protein; COG: COG0655 Multimeric flavodoxin WrbA. (449 aa)    
Predicted Functional Partners:
nspC
KEGG: hpa:HPAG1_0020 8.8e-85 carboxynorspermidine decarboxylase K01618; COG: COG0019 Diaminopimelate decarboxylase; Psort location: Cytoplasmic, score:8.96.
    
  0.973
EDM97924.1
KEGG: lla:L0121 2.9e-148 lysA; diaminopimelate decarboxylase K01586; COG: COG0019 Diaminopimelate decarboxylase; Psort location: Cytoplasmic, score:8.96.
    
  0.973
iorA
Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
  
    0.952
EDN00747.1
NAD dependent epimerase/dehydratase family protein; KEGG: sth:STH404 3.1e-18 putative NADH-ubiquinone oxidoreductase K00329:K00356; COG: COG0702 Predicted nucleoside-diphosphate-sugar epimerases; Psort location: Cytoplasmic, score:8.96.
  
 
  0.858
EDM99160.1
Hypothetical protein; COG: NOG31153 non supervised orthologous group.
    
  0.836
EDM99417.1
Transporter, CPA2 family; KEGG: cpf:CPF_2789 0.00079 spoIIE; stage II sporulation protein E K06382; COG: COG0475 Kef-type K+ transport systems, membrane components; Psort location: CytoplasmicMembrane, score:10.00.
  
 
 0.808
EDN01244.1
Transcriptional regulator, PadR family; COG: COG1695 Predicted transcriptional regulators.
       0.795
EDN00677.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: cpf:CPF_1474 1.9e-41 lacZ; beta-galactosidase K01190; COG: COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
    
  0.698
EDN00864.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: bfs:BF0029 3.4e-26 putative beta-galactosidase K01190; COG: COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
    
  0.698
EDM98412.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: xac:XAC4250 3.5e-65 beta-galactosidase K01190; COG: COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
    
  0.698
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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