STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN01032.1Histidinol phosphate phosphatase HisJ family; KEGG: oih:OB0554 4.8e-22 histidinol phosphatase K04486; COG: COG1387 Histidinol phosphatase and related hydrolases of the PHP family; Psort location: Cytoplasmic, score:8.96. (253 aa)    
Predicted Functional Partners:
hisB
KEGG: tte:TTE2136 5.0e-50 hisB; imidazoleglycerol-phosphate dehydratase K01693; COG: COG0131 Imidazoleglycerol-phosphate dehydratase; Psort location: Cytoplasmic, score:8.96.
  
 
 0.670
hisI
phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP; Belongs to the PRA-CH family.
  
 
 0.669
EDN01031.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
       0.664
EDN01033.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
       0.636
EDN01030.1
YcaO-like family; COG: COG1944 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96.
       0.628
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
  
 
 0.620
EDN01029.1
Radical SAM domain protein; KEGG: mtu:Rv3729 0.00024 possible transferase; COG: COG2896 Molybdenum cofactor biosynthesis enzyme; Psort location: Cytoplasmic, score:8.96.
       0.571
EDN01028.1
Radical SAM domain protein; KEGG: gka:GK0942 1.9e-18 Mg-protoporphyrin IX monomethyl ester oxidative cyclase K04034; COG: COG1032 Fe-S oxidoreductase; Psort location: Cytoplasmic, score:8.96.
  
    0.496
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
    0.454
hisH
Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
  
  
 0.450
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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