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rsmI protein (Pseudoflavonifractor capillosus) - STRING interaction network
"rsmI" - rRNA in Pseudoflavonifractor capillosus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rsmIrRNA (cytidine-2’-O-)-methyltransferase RsmI ; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (277 aa)    
Predicted Functional Partners:
BACCAP_01046
Methyltransferase domain protein (215 aa)
   
   
  0.856
cobA
Uroporphyrinogen-III C-methyltransferase (496 aa)
       
    0.832
BACCAP_01048
DNA-binding helix-turn-helix protein (82 aa)
              0.783
BACCAP_01047
Putative chloramphenicol O-acetyltransferase (206 aa)
              0.783
gidB
16S rRNA 7-methylguanosine methyltransferase ; Specifically methylates the N7 position of a guanine in 16S rRNA (238 aa)
 
   
  0.685
BACCAP_01111
Siroheme synthase domain protein (150 aa)
       
    0.668
yedF
Selenium metabolism protein YedF (207 aa)
       
    0.664
ksgA
S-adenosylmethionine-6-N’, N’-adenosyl(rRNA) dimethyltransferase ; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (290 aa)
   
   
  0.655
mraW
rRNA (cytosine-N(4)-)-methyltransferase RsmH ; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA (313 aa)
   
   
  0.649
cobI
Precorrin-2 C(20)-methyltransferase (230 aa)
       
    0.648
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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