STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN01136.1Hypothetical protein; KEGG: bce:BC0888 3.5e-06 N-acetylmuramoyl-L-alanine amidase K01447; COG: COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily); Psort location: OuterMembrane, score:9.52. (439 aa)    
Predicted Functional Partners:
EDN01279.1
Hypothetical protein; KEGG: bce:BC0888 5.1e-07 N-acetylmuramoyl-L-alanine amidase K01447; COG: COG2931 RTX toxins and related Ca2+-binding proteins.
  
     0.764
EDN01967.1
Hypothetical protein; KEGG: bcz:BCZK0800 5.9e-10 N-acetylmuramoyl-L-alanine amidase K01446; COG: COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.763
EDM98732.1
Hypothetical protein; KEGG: btk:BT9727_3111 5.2e-08 N-acetylmuramoyl-L-alanine amidase K01447; COG: NOG39119 non supervised orthologous group.
  
     0.758
EDM99794.1
Hypothetical protein; KEGG: bcz:BCZK0976 4.5e-06 S-layer homology and secreted protein with 1 GW repeat fusion protein K01463; COG: NOG39119 non supervised orthologous group.
  
    0.757
EDM97551.1
Hypothetical protein; KEGG: bce:BC0888 9.3e-06 N-acetylmuramoyl-L-alanine amidase K01447; COG: NOG09437 non supervised orthologous group.
  
     0.757
EDN00137.1
Hypothetical protein; KEGG: bce:BC0888 3.4e-13 N-acetylmuramoyl-L-alanine amidase K01447; COG: NOG09437 non supervised orthologous group.
  
     0.756
EDN00370.1
Hypothetical protein; KEGG: eci:UTI89_C1627 1.6e-21 entS; EntS/YbdA MFS transporter; COG: COG5295 Autotransporter adhesin.
  
     0.755
EDM97720.1
Hypothetical protein; KEGG: bcz:BCZK1628 6.1e-12 amiB; S-layer protein and N-acetylmuramoyl-L-alanine amidase fusion protein K01448; COG: NOG16349 non supervised orthologous group; Psort location: Extracellular, score:9.65.
  
     0.745
EDN00761.1
Hypothetical protein; KEGG: btk:BT9727_2310 0.0014 N-acetylmuramoyl-L-alanine amidase, family 3 K01448; COG: NOG09437 non supervised orthologous group.
  
     0.742
EDN01935.1
Hypothetical protein; KEGG: btk:BT9727_3111 1.4e-05 N-acetylmuramoyl-L-alanine amidase K01447; COG: COG2931 RTX toxins and related Ca2+-binding proteins.
  
     0.729
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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