STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN01163.1KEGG: tde:TDE0756 4.0e-73 iron compound ABC transporter, ATP-binding protein, putative K02013; COG: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; Psort location: Cytoplasmic, score:9.12. (261 aa)    
Predicted Functional Partners:
EDN01164.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; KEGG: sru:SRU_0812 7.9e-05 V-type H(+)-translocating pyrophosphatase K01507; COG: COG0609 ABC-type Fe3+-siderophore transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.996
EDN01165.1
Periplasmic binding protein; COG: COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 0.989
EDN00930.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; COG: COG0609 ABC-type Fe3+-siderophore transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.986
EDN01577.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; COG: COG0609 ABC-type Fe3+-siderophore transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.983
EDM99377.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; KEGG: fal:FRAAL2843 0.0053 livG; high-affinity branched-chain amino acid transport ATP-binding protein; putative membrane protein K06020; COG: COG0609 ABC-type Fe3+-siderophore transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.982
EDN00931.1
Periplasmic binding protein; COG: COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 0.875
EDN01576.1
Periplasmic binding protein; COG: COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 0.850
EDM99374.1
Periplasmic binding protein; COG: COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 0.846
EDN01162.1
CGGC domain protein; COG: COG5561 Predicted metal-binding protein; Psort location: Cytoplasmic, score:8.96.
 
     0.833
EDN00893.1
ABC transporter, substrate-binding protein; KEGG: bja:bll4305 1.4e-05 ribonuclease E; COG: COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Psort location: Periplasmic, score:9.76.
  
 
 0.688
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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