STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN00949.1KEGG: noc:Noc_2142 7.1e-51 ABC transporter, ATPase subunit; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: Cytoplasmic, score:9.12. (351 aa)    
Predicted Functional Partners:
EDN00948.1
Hypothetical protein; COG: COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.988
EDN00947.1
Hypothetical protein; COG: COG3225 ABC-type uncharacterized transport system involved in gliding motility, auxiliary component.
 
  
 0.950
EDN00367.1
Hypothetical protein; COG: COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.950
EDN00946.1
Hypothetical protein.
 
     0.923
EDN00366.1
Hypothetical protein; COG: COG3225 ABC-type uncharacterized transport system involved in gliding motility, auxiliary component.
 
  
 0.779
EDN00365.1
Hypothetical protein; KEGG: cal:orf19.4072 0.0011 HYR10; similar to cell surface flocculin K01186; COG: NOG21479 non supervised orthologous group.
 
     0.607
EDM99326.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score:10.00.
  
  0.525
EDM99315.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score:10.00.
  
  0.525
EDM98209.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score:10.00.
  
  0.516
EDM98210.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score:10.00.
  
  0.516
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.