STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN00894.1Hypothetical protein. (98 aa)    
Predicted Functional Partners:
EDN00895.1
Transcriptional regulator, Fur family; COG: COG0735 Fe2+/Zn2+ uptake regulation proteins; Psort location: Cytoplasmic, score:8.96; Belongs to the Fur family.
       0.704
EDN00893.1
ABC transporter, substrate-binding protein; KEGG: bja:bll4305 1.4e-05 ribonuclease E; COG: COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Psort location: Periplasmic, score:9.76.
       0.653
EDN00890.1
Hypothetical protein.
       0.500
EDN00892.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_1675 6.6e-32 ATPase K02074; COG: COG1121 ABC-type Mn/Zn transport systems, ATPase component.
       0.499
EDN00891.1
ABC 3 transport family protein; KEGG: dar:Daro_1270 0.0047 glycosyl transferase, family 4 K02851; COG: COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
       0.498
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.