STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN00658.1Transcriptional regulator, BlaI/MecI/CopY family; KEGG: bcz:BCZK0993 2.3e-13 blaI; beta-lactamase (penicillinase) repressor K01467; COG: COG3682 Predicted transcriptional regulator; Psort location: Cytoplasmic, score:8.96. (125 aa)    
Predicted Functional Partners:
EDN00659.1
Peptidase, M56 family; COG: COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component; Psort location: CytoplasmicMembrane, score:9.46.
 
 
  0.966
EDN01004.1
Peptidase, M56 family; COG: COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component; Psort location: CytoplasmicMembrane, score:9.46.
 
 
  0.850
EDM99711.1
Peptidase, M56 family; COG: COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component; Psort location: CytoplasmicMembrane, score:9.80.
 
 
  0.850
EDM99181.1
Peptidase, M56 family; COG: COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component; Psort location: CytoplasmicMembrane, score:9.50.
 
 
  0.850
EDM97963.1
Peptidase, M56 family; COG: COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component; Psort location: CytoplasmicMembrane, score:10.00.
 
 
  0.850
EDN00983.1
Peptidase, M56 family; COG: COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component; Psort location: CytoplasmicMembrane, score:10.00.
 
 
  0.848
EDM98291.1
Peptidase, M56 family; COG: COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component; Psort location: CytoplasmicMembrane, score:9.46.
 
 
  0.848
EDM97482.1
Peptidase, M56 family; COG: COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component; Psort location: CytoplasmicMembrane, score:10.00.
 
 
  0.848
EDN01320.1
Copper-exporting ATPase; KEGG: tde:TDE0008 1.7e-232 copper-translocating P-type ATPase K01533; COG: COG2217 Cation transport ATPase; Psort location: CytoplasmicMembrane, score:10.00.
  
  
 0.559
EDN00656.1
DnaD domain protein; COG: COG3935 Putative primosome component and related proteins.
       0.499
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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