STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN00740.1Hypothetical protein; Psort location: Cytoplasmic, score:8.96. (211 aa)    
Predicted Functional Partners:
xylB
Xylulokinase; KEGG: cac:CAC2612 8.6e-142 xylB; xylulose kinase K00854; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score:8.96.
 
  
 0.985
EDN00741.1
Hypothetical protein; COG: COG2407 L-fucose isomerase and related proteins; Psort location: Cytoplasmic, score:8.96.
 
   
 0.957
EDN00738.1
Glycosyl hydrolase, family 43; KEGG: pat:Patl_3728 1.3e-13 alpha-L-arabinofuranosidase K01209; COG: NOG10881 non supervised orthologous group; Belongs to the glycosyl hydrolase 43 family.
 
     0.630
EDN01870.1
Carbohydrate kinase, FGGY family protein; KEGG: bcl:ABC0374 8.4e-96 rhamnulokinase and L-rhamnose isomerase K00848:K01813; COG: COG1070 Sugar (pentulose and hexulose) kinases.
 
    0.625
EDN00742.1
Transcriptional regulator, GntR family; KEGG: reh:H16_A3019 5.6e-08 hutC; histidine utilization repressor; COG: COG2186 Transcriptional regulators.
       0.594
EDN00736.1
ROK family protein; KEGG: bce:BC4260 5.9e-24 glucokinase K00845; COG: COG1940 Transcriptional regulator/sugar kinase; Psort location: Cytoplasmic, score:9.26.
 
  
 0.575
EDN00737.1
Hypothetical protein.
       0.415
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.