STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN00752.1ABC transporter, permease protein; KEGG: hpa:HPAG1_0451 3.4e-05 molybdenum ABC transporter ModB K06022; COG: COG0395 ABC-type sugar transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00. (278 aa)    
Predicted Functional Partners:
EDN00751.1
KEGG: ava:Ava_0243 0.00055 molybdate ABC transporter, permease protein K02018; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 0.989
EDN01997.1
KEGG: ret:RHE_PC00104 1.6e-85 probable sugar ABC transporter, ATP-binding protein K05816; COG: COG3839 ABC-type sugar transport systems, ATPase components; Psort location: Cytoplasmic, score:9.12.
 
 0.981
EDN02029.1
KEGG: sth:STH1782 3.2e-103 sugar ABC transportor ATP-binding protein K05816; COG: COG3839 ABC-type sugar transport systems, ATPase components; Psort location: CytoplasmicMembrane, score:9.59; Belongs to the ABC transporter superfamily.
 
 0.981
EDN00675.1
KEGG: cya:CYA_1846 0.00077 modB; molybdate ABC transporter, permease protein K02018; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 0.964
EDN00695.1
COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 0.962
EDN01999.1
KEGG: ava:Ava_0243 0.0080 molybdate ABC transporter, permease protein K02018; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 0.947
EDN01116.1
ABC transporter, permease protein; KEGG: baa:BA_0884 0.00065 binding-protein-dependent transport systems inner membrane component K00294; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 0.946
EDN00674.1
ABC transporter, solute-binding protein; COG: COG1653 ABC-type sugar transport system, periplasmic component.
 
 0.895
EDN00694.1
ABC transporter, solute-binding protein; COG: COG1653 ABC-type sugar transport system, periplasmic component.
 
 0.893
EDN02008.1
Hypothetical protein; COG: COG1653 ABC-type sugar transport system, periplasmic component.
  
 0.829
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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