STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN00758.1Hypothetical protein; COG: NOG18757 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96. (124 aa)    
Predicted Functional Partners:
EDN00756.1
DnaJ domain protein; KEGG: cme:CMJ043C 9.8e-07 phycocyanobilin lyase alpha subunit K02288; COG: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; Psort location: Cytoplasmic, score:9.26.
       0.746
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
       0.685
EDN00760.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bca:BCE_2042 6.7e-55 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:9.82.
 
     0.616
EDN00757.1
Hypothetical protein.
       0.572
EDN00759.1
Response regulator receiver domain protein; KEGG: ava:Ava_3369 7.2e-35 two component transcriptional regulator, winged helix family; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.97.
       0.554
EDN01701.1
Efflux ABC transporter, permease protein; KEGG: mpe:MYPE6470 9.7e-12 parC; DNA topoisomerase IV subunit A K02621; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: OuterMembrane, score:8.97.
  
     0.479
EDN00754.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
       0.439
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.