STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN00784.1Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; COG: COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein. (99 aa)    
Predicted Functional Partners:
EDN00786.1
BMC domain protein; COG: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
 
 0.987
EDN00776.1
BMC domain protein; KEGG: rxy:Rxyl_2308 1.1e-05 penicillin-binding protein 1A K05364; COG: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
 
 0.974
EDN00779.1
BMC domain protein; COG: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
 
 
 0.974
EDN00778.1
BMC domain protein; COG: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
 
 
 0.972
EDN02054.1
BMC domain protein; KEGG: rme:Rmet_0797 0.0029 ABC transporter-related protein K02056; COG: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
 
 
 0.957
EDN00791.1
BMC domain protein; KEGG: chu:CHU_2402 0.00047 sucD; succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) K01902; COG: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
 
 
 0.957
EDN00782.1
Ethanolamine utilization protein EutJ family protein; KEGG: reh:H16_A1163 3.5e-06 hscA; molecular chaperone (HscA); COG: COG4820 Ethanolamine utilization protein, possible chaperonin; Psort location: Cytoplasmic, score:8.96.
 
  
 0.880
EDN00785.1
Respiratory-chain NADH dehydrogenase 51 Kd subunit; KEGG: eci:UTI89_C1819 1.0e-28 rnfC; electron transport complex protein RnfC K03615; COG: COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC; Psort location: Cytoplasmic, score:8.96.
 
   
 0.753
EDN00780.1
Putative ATP:cob(I)alamin adenosyltransferase; KEGG: ctc:CTC02171 1.3e-44 ethanolamine utilization protein K04032; COG: COG4812 Ethanolamine utilization cobalamin adenosyltransferase; Psort location: Cytoplasmic, score:8.96.
 
  
 0.701
EDN00788.1
COG: COG4766 Ethanolamine utilization protein; Psort location: Cytoplasmic, score:8.96.
 
  
 0.689
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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