STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN00796.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: fnu:FN0077 1.1e-45 ethanolamine two-component sensor kinase; COG: COG3920 Signal transduction histidine kinase. (457 aa)    
Predicted Functional Partners:
EDN00797.1
Response regulator receiver domain protein; KEGG: rru:Rru_A1385 1.5e-18 two component, sigma54 specific, transcriptional regulator, fis family; COG: COG3707 Response regulator with putative antiterminator output domain; Psort location: Cytoplasmic, score:9.97.
   
 0.954
EDN00798.1
COG: COG4766 Ethanolamine utilization protein.
 
   
 0.849
EDM98859.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: syn:slr2104 3.8e-63 hik22; two-component hybrid histidine kinase K02486; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:7.88.
    
 0.843
EDN00792.1
BMC domain protein; COG: COG4816 Ethanolamine utilization protein.
 
     0.832
EDM98501.1
HD domain protein; KEGG: ava:Ava_1777 1.3e-20 metal dependent phosphohydrolase, HD region with response regulator receiver modulation K07814; COG: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; Psort location: Cytoplasmic, score:8.96.
    
 0.818
EDN00770.1
Response regulator receiver domain protein; KEGG: mth:MTH1607 2.8e-19 sensory transduction regulatory protein; COG: COG3707 Response regulator with putative antiterminator output domain; Psort location: Cytoplasmic, score:9.97.
   
 0.817
eutC-3
KEGG: ctc:CTC02175 3.5e-81 ethanolamine ammonia-lyase light chain K03736; COG: COG4302 Ethanolamine ammonia-lyase, small subunit; Psort location: Cytoplasmic, score:8.96; Belongs to the EutC family.
 
   
 0.766
EDN00772.1
COG: COG4819 Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition; Psort location: Cytoplasmic, score:8.96.
 
   
 0.736
EDN02059.1
COG: COG4819 Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition; Psort location: CytoplasmicMembrane, score:9.82.
 
   
 0.727
eutB-3
KEGG: lwe:lwe1133 1.5e-130 eutB; ethanolamine ammonia lyase large subunit K01748; COG: COG4303 Ethanolamine ammonia-lyase, large subunit; Psort location: Cytoplasmic, score:8.96.
     
 0.686
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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