STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN00374.1Hypothetical protein; COG: NOG32697 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96. (169 aa)    
Predicted Functional Partners:
EDN00373.1
Hypothetical protein; COG: NOG20089 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
       0.773
EDN00562.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
  
     0.655
EDN02014.1
TIGR02453 family protein; COG: COG5587 Uncharacterized conserved protein.
  
     0.612
EDN01964.1
Hypothetical protein; KEGG: mmr:Mmar10_2493 4.0e-08 serralysin K01406; COG: COG5295 Autotransporter adhesin.
  
     0.595
EDM99797.1
Hypothetical protein; KEGG: eci:UTI89_C4946 0.0081 putative member of ShlA/HecA/FhaA exoprotein family; COG: COG0845 Membrane-fusion protein.
  
     0.552
EDM99685.1
Hypothetical protein.
  
     0.517
EDM99794.1
Hypothetical protein; KEGG: bcz:BCZK0976 4.5e-06 S-layer homology and secreted protein with 1 GW repeat fusion protein K01463; COG: NOG39119 non supervised orthologous group.
  
     0.517
EDN01401.1
KEGG: ava:Ava_3135 1.6e-09 hypothetical protein; COG: COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase.
  
    0.503
EDM99965.1
Hypothetical protein; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
  
     0.500
EDN00469.1
NlpC/P60 family protein; KEGG: bpm:BURPS1710b_A1202 8.2e-07 serine/threonine protein kinase K00870; COG: COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
  
     0.497
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.