STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN00434.1Hypothetical protein; Psort location: Cytoplasmic, score:8.96. (144 aa)    
Predicted Functional Partners:
EDN00430.1
COG: COG0629 Single-stranded DNA-binding protein.
       0.773
EDN00431.1
Hypothetical protein; COG: NOG09002 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
       0.773
EDN00432.1
Hypothetical protein.
       0.773
EDN00433.1
Hypothetical protein.
       0.773
EDN00435.1
Hypothetical protein; COG: NOG15863 non supervised orthologous group.
       0.558
EDN00436.1
Hypothetical protein.
       0.558
EDN00429.1
Cna protein B-type domain protein; COG: COG4932 Predicted outer membrane protein.
       0.548
EDN00437.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
       0.495
dcm
KEGG: sag:SAG1869 4.1e-56 prophage LambdaSa2, type II DNA modification methyltransferase, putative K00558; COG: COG0270 Site-specific DNA methylase; Psort location: Cytoplasmic, score:8.96.
       0.474
EDN00439.1
Hypothetical protein; COG: NOG18822 non supervised orthologous group.
       0.474
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.