STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN00133.1KEGG: cpf:CPF_1991 1.6e-94 protein kinase K08884; COG: COG2815 Uncharacterized protein conserved in bacteria; Psort location: CytoplasmicMembrane, score:9.82. (712 aa)    
Predicted Functional Partners:
EDN00131.1
Protein phosphatase 2C; KEGG: gka:GK1175 9.0e-44 serine/threonine phosphatase K01090; COG: COG0631 Serine/threonine protein phosphatase; Psort location: Cytoplasmic, score:8.96.
 0.999
EDN00819.1
Hypothetical protein; KEGG: lsa:LSA0691 0.00043 putative serine/threonine protein phosphatase K01090; COG: NOG06775 non supervised orthologous group.
  
 0.987
EDM98399.1
FHA domain protein; KEGG: ana:all0743 8.3e-05 cyaD; adenylate cyclase K01768; COG: COG0772 Bacterial cell division membrane protein; Psort location: CytoplasmicMembrane, score:10.00; Belongs to the SEDS family.
  
 
 0.979
rsgA
Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
 
  
 0.944
EDN01839.1
Chain length determinant protein; KEGG: nca:Noca_4185 4.6e-40 lipopolysaccharide biosynthesis; COG: COG3944 Capsular polysaccharide biosynthesis protein.
    
 
 0.932
EDN01840.1
Chain length determinant protein; KEGG: cch:Cag_0649 2.2e-28 uncharacterized protein involved in exopolysaccharide biosynthesis-like K00903; COG: COG0489 ATPases involved in chromosome partitioning; Psort location: CytoplasmicMembrane, score:9.82.
    
 
 0.932
EDM98859.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: syn:slr2104 3.8e-63 hik22; two-component hybrid histidine kinase K02486; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:7.88.
  
 0.851
EDN00566.1
Hypothetical protein; KEGG: lwe:lwe2040 1.1e-10 cell division protein DivIVA K01549; COG: COG3599 Cell division initiation protein; Psort location: Cytoplasmic, score:8.96.
  
 
 0.775
EDM99358.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: mav:MAV_0432 3.1e-11 serine/threonine-protein kinase RsbT K08282; COG: COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase); Psort location: Cytoplasmic, score:8.96.
    
 
 0.742
spoIIAB
Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
    
 
 0.742
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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