STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN00176.1M42 glutamyl aminopeptidase; KEGG: cac:CAC0215 6.1e-77 endoglucanase, aminopeptidase M42 family K01179; COG: COG1363 Cellulase M and related proteins; Psort location: Cytoplasmic, score:8.96. (343 aa)    
Predicted Functional Partners:
EDN00177.1
M42 glutamyl aminopeptidase; KEGG: sth:STH1079 7.0e-60 endo-1,4-beta-glucanase K01179; COG: COG1363 Cellulase M and related proteins; Psort location: Cytoplasmic, score:8.96.
 
    
0.838
EDN00175.1
M42 glutamyl aminopeptidase; KEGG: tte:TTE0443 2.3e-77 frvX3; Cellulase M and related proteins K01179; COG: COG1363 Cellulase M and related proteins; Psort location: Cytoplasmic, score:8.96.
 
    
0.812
murD
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
       0.688
EDN00174.1
Aluminum resistance protein; KEGG: ava:Ava_4213 2.4e-105 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme K01758; COG: COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance.
       0.639
EDN00179.1
Hypothetical protein.
       0.611
yunB
Sporulation protein YunB; COG: NOG11559 non supervised orthologous group.
       0.480
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.