STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN00013.1KEGG: ace:Acel_1642 1.0e-129 aldehyde oxidase and xanthine dehydrogenase K00087; COG: COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs; Psort location: CytoplasmicMembrane, score:9.82. (771 aa)    
Predicted Functional Partners:
EDN00011.1
FAD binding domain in molybdopterin dehydrogenase; KEGG: chy:CHY_0690 4.8e-45 coxM; carbon monoxide dehydrogenase, medium subunit K00190; COG: COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs.
 0.999
EDN00012.1
2Fe-2S iron-sulfur cluster-binding domain protein; KEGG: rle:pRL80024 1.3e-37 coxS, cutC, cutS; putative iron-sulphur cluster carbon monooxide dehydrogenase subunit K00190; COG: COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs; Psort location: Cytoplasmic, score:8.96.
 0.999
EDN00824.1
KEGG: mta:Moth_1959 6.0e-70 molybdopterin dehydrogenase, FAD-binding K00087; COG: COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs.
 0.998
EDN00825.1
2Fe-2S iron-sulfur cluster-binding domain protein; KEGG: aha:AHA_2179 2.2e-40 carbon monoxide dehydrogenase small chain K00190; COG: COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs; Psort location: Cytoplasmic, score:8.96.
 0.998
EDN00007.1
4Fe-4S binding domain protein; KEGG: mja:MJ0155 1.6e-06 formate dehydrogenase, iron-sulfur subunit K00124; COG: NOG06373 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
  0.957
EDM98019.1
Putative selenium-dependent molybdenum hydroxylase 1; KEGG: rde:RD1_1533 2.8e-111 mop; aldehyde oxidoreductase, putative K00157; COG: COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs; Psort location: CytoplasmicMembrane, score:7.88.
 
0.929
EDN00588.1
Hypothetical protein; KEGG: dde:Dde_3539 2.4e-98 aldehyde oxidoreductase; COG: COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs; Psort location: CytoplasmicMembrane, score:7.88.
 
0.928
EDN01686.1
Putative xanthine dehydrogenase accessory factor; KEGG: bsu:BG13992 4.1e-13 pucA, yurF; xanthine dehydrogenase K00087; COG: COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
 
 
 0.883
EDN01682.1
Hypothetical protein; KEGG: hma:pNG7236 8.9e-21 glmU; UDP-N-acetylglucosamine pyrophosphorylase K00972; COG: COG2068 Uncharacterized MobA-related protein.
 
  
 0.839
EDN00714.1
4Fe-4S binding domain protein; KEGG: cch:Cag_0580 4.0e-78 glutamate synthase (NADPH) small chain K00264; COG: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases; Psort location: Cytoplasmic, score:9.97.
    
 0.811
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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