STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM99836.1Hypothetical protein; Psort location: CytoplasmicMembrane, score:10.00. (173 aa)    
Predicted Functional Partners:
EDM99835.1
PhoH family protein; KEGG: reh:H16_A0527 8.8e-69 phoH; phosphate starvation-inducible protein PhoH,predicted ATPase; COG: COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase; Psort location: Cytoplasmic, score:9.97.
       0.773
EDM99837.1
Hypothetical protein.
       0.773
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.773
EDM99839.1
Hypothetical protein.
       0.773
EDM99834.1
Putative sporulation protein YqfD; COG: NOG07866 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
       0.634
EDM99833.1
Putative sporulation protein YqfC; COG: NOG13846 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
       0.591
era
Ribosome biogenesis GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
       0.584
EDM99841.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
       0.446
cca
KEGG: ctc:CTC01205 1.1e-57 tRNA nucleotidyltransferase (CCA-adding enzyme) K00974; COG: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; Psort location: Cytoplasmic, score:8.96.
       0.413
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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