STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM99861.1Hypothetical protein; KEGG: pae:PA4706 2.0e-06 putative iron transport system ATP-binding protein K02013; COG: COG3910 Predicted ATPase; Psort location: Cytoplasmic, score:8.96. (256 aa)    
Predicted Functional Partners:
hflX
GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
       0.773
EDM99862.1
Acetyltransferase, GNAT family; KEGG: bth:BT4506 1.9e-24 putative acetyltransferase K03827; COG: COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; Psort location: Cytoplasmic, score:8.96.
       0.773
EDM99863.1
YigZ family protein; KEGG: ctc:CTC02216 5.2e-32 thymidylate synthase K00560; COG: COG1739 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96.
       0.773
EDM99859.1
COG: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
       0.639
EDM99864.1
Putative dGTPase; KEGG: tte:TTE1757 4.1e-103 dgt; dGTP triphosphohydrolase K01129; COG: COG0232 dGTP triphosphohydrolase; Psort location: Cytoplasmic, score:8.96; Belongs to the dGTPase family. Type 2 subfamily.
       0.471
EDM99857.1
Hypothetical protein.
       0.417
rpmE
Ribosomal protein L31; Binds the 23S rRNA.
       0.417
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.