STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM99672.1FAD binding domain protein; KEGG: ctc:CTC01847 1.1e-57 fumarate reductase flavoprotein subunit K00244; COG: COG3976 Uncharacterized protein conserved in bacteria; Psort location: Periplasmic, score:9.76. (628 aa)    
Predicted Functional Partners:
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
  
 
 0.966
EDM99350.1
4Fe-4S binding domain protein; KEGG: tte:TTE0893 3.2e-222 nuoF; NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit K00335; COG: COG1145 Ferredoxin; Psort location: Cytoplasmic, score:9.97.
 
 0.960
EDM97840.1
Hypothetical protein; KEGG: mma:MM1656 6.6e-80 oxidoreductase K00100; COG: COG0723 Rieske Fe-S protein.
  
 0.870
EDN01923.1
Flavocytochrome c; KEGG: fnu:FN0050 2.1e-108 fumarate reductase flavoprotein subunit K00244; COG: COG3976 Uncharacterized protein conserved in bacteria; Psort location: Periplasmic, score:9.76.
 
  
 
0.846
EDM99829.1
KEGG: ctc:CTC01488 2.8e-104 fumarate reductase flavoprotein subunit K00244; COG: COG3976 Uncharacterized protein conserved in bacteria; Psort location: Periplasmic, score:9.76.
 
  
 
0.846
EDN02037.1
FMN-binding domain protein; KEGG: lpl:lp_0952 9.1e-06 fumarate reductase, flavoprotein subunit precursor K00238; COG: COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
 
  
  0.839
EDN01389.1
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type; KEGG: cac:CAC3091 8.2e-82 fumarate hydratase, subunit A (N-terminal domain of FumA E.coli) class I K01677; COG: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain; Psort location: Cytoplasmic, score:8.96.
  
 
 0.832
EDM99811.1
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type; KEGG: ctc:CTC02561 5.4e-53 fumarate hydratase subunit B K01678; COG: COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain.
  
 
 0.814
EDN00714.1
4Fe-4S binding domain protein; KEGG: cch:Cag_0580 4.0e-78 glutamate synthase (NADPH) small chain K00264; COG: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases; Psort location: Cytoplasmic, score:9.97.
  
 0.803
EDN00711.1
Oxidoreductase NAD-binding domain protein; KEGG: reh:H16_B1359 9.0e-28 paaE2; phenylacetic acid degradation protein E,flavodoxin reductase; COG: COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Psort location: Cytoplasmic, score:8.96.
  
 
 0.781
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.