STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM99677.1Malic enzyme, NAD binding domain protein; KEGG: mta:Moth_0401 5.1e-121 malate dehydrogenase (oxaloacetate decarboxylating) K00027; COG: COG0281 Malic enzyme. (390 aa)    
Predicted Functional Partners:
EDM99811.1
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type; KEGG: ctc:CTC02561 5.4e-53 fumarate hydratase subunit B K01678; COG: COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain.
 
 
 0.967
pta
KEGG: lla:L107797 1.5e-87 pta; phosphate acetyltransferase K00625; COG: COG0280 Phosphotransacetylase.
 
 
 0.952
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
  
 
 0.934
pyc
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
 0.922
pyk
Pyruvate kinase; KEGG: tte:TTE1815 4.7e-134 pykF; pyruvate kinase K00873; COG: COG0469 Pyruvate kinase; Psort location: Cytoplasmic, score:8.96.
  
 0.911
EDN01389.1
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type; KEGG: cac:CAC3091 8.2e-82 fumarate hydratase, subunit A (N-terminal domain of FumA E.coli) class I K01677; COG: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain; Psort location: Cytoplasmic, score:8.96.
  
 
 0.896
EDM99350.1
4Fe-4S binding domain protein; KEGG: tte:TTE0893 3.2e-222 nuoF; NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit K00335; COG: COG1145 Ferredoxin; Psort location: Cytoplasmic, score:9.97.
    
 0.883
EDN00714.1
4Fe-4S binding domain protein; KEGG: cch:Cag_0580 4.0e-78 glutamate synthase (NADPH) small chain K00264; COG: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases; Psort location: Cytoplasmic, score:9.97.
  
 
 0.882
ilvB
Acetolactate synthase, large subunit, biosynthetic type; KEGG: cac:CAC3169 3.9e-146 ilvB; acetolactate synthase large subunit K01652; COG: COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; Psort location: Cytoplasmic, score:8.96.
  
 
 0.871
ppdK
Pyruvate, phosphate dikinase; KEGG: tte:TTE0981 0. ppsA2; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase K01006; COG: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; Psort location: Cytoplasmic, score:9.97; Belongs to the PEP-utilizing enzyme family.
  
 
 0.860
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.