STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM99531.1ABC transporter, ATP-binding protein; KEGG: rru:Rru_A0881 4.7e-86 ABC transporter component K06021; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score:10.00. (585 aa)    
Predicted Functional Partners:
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.899
EDM99532.1
KEGG: rru:Rru_A0882 5.8e-72 ABC transporter, transmembrane region K06021; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
    
0.820
EDM99533.1
Iron dependent repressor DNA binding domain protein; COG: COG1321 Mn-dependent transcriptional regulator; Psort location: Cytoplasmic, score:8.96.
       0.773
EDM99529.1
Transcriptional regulator, TetR family; COG: NOG38946 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
     0.681
EDM99530.1
Conserved hypothetical protein TIGR02185; COG: NOG13235 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:10.00.
       0.658
EDN01890.1
KEGG: pen:PSEEN0205 3.2e-64 amino acid ABC transporter, ATP-binding protein; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score:7.88.
 
     
0.627
potA
Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
     
0.610
EDM99534.1
Transcriptional regulatory protein, C-terminal domain protein; KEGG: ava:Ava_1878 1.9e-15 two component transcriptional regulator, winged helix family K07659; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.97.
       0.576
EDN00615.1
Hypothetical protein; KEGG: son:SO1042 8.4e-80 amino acid ABC transporter, ATP-binding protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score:7.88.
 
     
0.573
EDM99506.1
Transcriptional regulator, TetR family; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.96.
 
     0.500
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.