STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM99591.1Hypothetical protein; KEGG: sab:SAB1265c 2.0e-08 probable nitric oxide reductase protein K00377; COG: COG4548 Nitric oxide reductase activation protein; Psort location: Cytoplasmic, score:8.96. (620 aa)    
Predicted Functional Partners:
EDM99592.1
Von Willebrand factor type A domain protein; KEGG: rru:Rru_A0207 8.1e-08 cobalt chelatase, CobT subunit; COG: COG4548 Nitric oxide reductase activation protein.
  
 0.965
EDM97534.1
Hypothetical protein; KEGG: ngo:NGO0998 2.6e-06 putative DNA primase K02316; COG: COG0358 DNA primase (bacterial type).
  
     0.767
EDM97539.1
YqaJ viral recombinase family protein; COG: COG5377 Phage-related protein, predicted endonuclease.
 
     0.761
EDM98496.1
S1 RNA binding domain protein; KEGG: nph:NP1094A 3.8e-07 chlID, chlD; magnesium chelatase (protoporphyrin IX magnesium-chelatase), fused subunits ChlI/ChlD K03404:K03405; COG: COG0539 Ribosomal protein S1; Psort location: Cytoplasmic, score:8.96.
  
     0.755
EDM98497.1
TraG/TraD family protein; KEGG: cal:orf19.4334 7.8e-06 hypothetical protein K00960; COG: COG3505 Type IV secretory pathway, VirD4 components.
  
     0.737
EDM99589.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
       0.732
EDM99590.1
Hypothetical protein.
       0.732
EDM98512.1
Hypothetical protein.
  
     0.727
EDM98504.1
NlpC/P60 family protein; KEGG: psp:PSPPH_0470 0.0046 NLP/P60 family protein K01183; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
  
     0.724
EDM99581.1
Hypothetical protein; COG: COG0727 Predicted Fe-S-cluster oxidoreductase; Psort location: Cytoplasmic, score:8.96.
  
  
 0.713
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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