STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM99026.1Hypothetical protein. (43 aa)    
Predicted Functional Partners:
EDN00201.1
Putative stage III sporulation protein AE; KEGG: pae:PA3560 0.0032 fruA; phosphotransferase system, fructose-specific IIBC component K02769:K02770; COG: NOG06161 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:10.00.
  
    0.867
EDN00198.1
Hypothetical protein; KEGG: cal:orf19.570 0.00061 HYR9; similar to HYR1 K01186; COG: NOG17862 non supervised orthologous group.
  
  
 0.759
EDN00199.1
Putative stage III sporulation protein AG; COG: NOG11553 non supervised orthologous group.
  
  
 0.738
EDN00169.1
LysM domain protein; COG: COG1388 FOG: LysM repeat; Psort location: Cytoplasmic, score:8.96.
  
   
 0.693
EDN00276.1
sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
  
  
 0.668
EDN00150.1
Hypothetical protein; COG: NOG18028 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
    0.653
EDN01991.1
COG: COG0629 Single-stranded DNA-binding protein.
  
     0.643
spoIID
COG: COG2385 Sporulation protein and related proteins.
     
 0.631
EDN00203.1
Stage III sporulation protein AC; COG: NOG17863 non supervised orthologous group.
  
  
 0.603
EDN00628.1
Hypothetical protein; COG: NOG13213 non supervised orthologous group.
  
  
 0.584
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.