STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM99188.1Hypothetical protein; COG: NOG16920 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96. (145 aa)    
Predicted Functional Partners:
EDM99546.1
Hypothetical protein; COG: NOG21981 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
     0.783
EDM99545.1
Hypothetical protein; COG: NOG16920 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
     0.775
EDM99187.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
       0.773
EDM99610.1
Site-specific recombinase, phage integrase family; COG: COG4974 Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
    0.749
EDM97871.1
Hypothetical protein; COG: NOG21981 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
    0.722
EDM97531.1
DNA binding domain, excisionase family; Psort location: Cytoplasmic, score:8.96.
  
     0.721
EDM99330.1
Hypothetical protein; COG: NOG37851 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
     0.700
EDM98588.1
Hypothetical protein; COG: NOG37851 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
     0.700
EDM99766.1
Relaxase/mobilization nuclease domain protein; COG: COG3843 Type IV secretory pathway, VirD2 components (relaxase); Psort location: Cytoplasmic, score:8.96.
  
     0.444
EDM98655.1
Site-specific recombinase, phage integrase family; COG: COG4974 Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
    0.429
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.