STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM99257.1Hypothetical protein. (152 aa)    
Predicted Functional Partners:
EDM99258.1
Hypothetical protein.
       0.773
EDM99259.1
KEGG: hne:HNE_2628 3.1e-06 peptidase, M23 family; COG: COG0739 Membrane proteins related to metalloendopeptidases.
       0.773
EDM99256.1
Hypothetical protein.
       0.584
EDM99260.1
Hypothetical protein.
       0.558
EDM99261.1
Hypothetical protein.
       0.527
EDM99262.1
Hypothetical protein.
       0.527
EDM99263.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
       0.524
EDM99264.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
       0.524
EDM99265.1
Hypothetical protein.
       0.524
EDM99266.1
Hypothetical protein; Psort location: OuterMembrane, score:8.97.
       0.490
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.