STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM98734.1ABC transporter, ATP-binding protein; KEGG: fal:FRAAL6466 9.8e-54 ABC-type transport systems, involved in lipoprotein release, ATPase components K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score:9.82. (247 aa)    
Predicted Functional Partners:
EDM98733.1
KEGG: pen:PSEEN3665 1.6e-44 efflux ABC transporter, ATP-binding/permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 0.998
EDN00342.1
Efflux ABC transporter, permease protein; KEGG: cch:Cag_0337 8.3e-57 ATPase K06020; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 0.995
EDM99795.1
Efflux ABC transporter, permease protein; KEGG: rru:Rru_A3236 4.2e-46 hypothetical protein K06020; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 0.995
EDN01701.1
Efflux ABC transporter, permease protein; KEGG: mpe:MYPE6470 9.7e-12 parC; DNA topoisomerase IV subunit A K02621; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: OuterMembrane, score:8.97.
  
 0.990
EDN00344.1
Efflux transporter, RND family, MFP subunit; KEGG: sde:Sde_2572 0.00033 hypothetical protein K00658; COG: COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.978
EDN01355.1
Efflux ABC transporter, permease protein; KEGG: cch:Cag_0337 1.5e-21 ATPase K06020; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 0.960
EDM99512.1
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL4836 2.5e-39 oppD; oligopeptide transport protein of the ABC superfamily, ATP-binding component; COG: COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase.
 
    
0.911
EDM98606.1
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL4836 2.7e-44 oppD; oligopeptide transport protein of the ABC superfamily, ATP-binding component; COG: COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Psort location: CytoplasmicMembrane, score:8.02.
 
    
0.906
EDM98456.1
ABC transporter, permease protein; KEGG: bpm:BURPS1710b_A0449 1.8e-05 glycine betaine/L-proline ABC transporter, permease protein K02001; COG: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
 
    0.876
EDM98607.1
ABC transporter, permease protein; COG: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
 
    0.862
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.