STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM98796.1Response regulator receiver domain protein; KEGG: rru:Rru_A0376 7.1e-09 transcriptional regulator, LytR/AlgR family K07705; COG: COG3279 Response regulator of the LytR/AlgR family; Psort location: Cytoplasmic, score:8.96. (236 aa)    
Predicted Functional Partners:
EDM98797.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: sha:SH0994 3.5e-07 agrC; AgrC K07706; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: CytoplasmicMembrane, score:10.00.
 
  
  0.947
EDM98693.1
KEGG: ppr:PBPRA2763 1.9e-05 hypothetical signal transduction histidine kinase regulating citrate/malate metabolism K07701; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.832
EDM97802.1
KEGG: tte:TTE0562 3.5e-09 baeS2; sensory transduction histidine kinases K07706; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: CytoplasmicMembrane, score:9.46.
 
 
  0.809
EDM97521.1
KEGG: tte:TTE0562 3.4e-09 baeS2; sensory transduction histidine kinases K07706; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: CytoplasmicMembrane, score:10.00.
 
 
  0.807
EDN00352.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ssp:SSP0840 2.8e-07 accessory gene regulator C K07706; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: Cytoplasmic, score:8.96.
 
 
  0.787
EDN01467.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: vvy:VV1603 2.3e-06 citA; putative sensor kinase CitA K07700; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: CytoplasmicMembrane, score:10.00.
  
  
  0.777
EDM97352.1
Hypothetical protein; KEGG: tte:TTE0562 1.6e-08 baeS2; sensory transduction histidine kinases K07706; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: CytoplasmicMembrane, score:9.46.
  
  
  0.776
EDM97792.1
Hypothetical protein; KEGG: ppr:PBPRA2346 0.00026 uhpB; putative UhpB, Signal transduction histidine kinase, glucose-6-phosphate specific K07675; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: CytoplasmicMembrane, score:9.16.
  
  
  0.775
EDM98420.1
KEGG: tte:TTE0562 3.5e-07 baeS2; sensory transduction histidine kinases K07706; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: CytoplasmicMembrane, score:9.46.
  
  
  0.773
EDN01598.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: tte:TTE0562 2.6e-11 baeS2; sensory transduction histidine kinases K07706; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
 
 0.770
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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