STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM98837.1O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase; KEGG: bfr:BF3545 1.5e-169 O-acetylhomoserine (thiol)-lyase K01740; COG: COG2873 O-acetylhomoserine sulfhydrylase; Psort location: Cytoplasmic, score:9.26. (429 aa)    
Predicted Functional Partners:
metA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
 
 
 0.977
EDM98824.1
KEGG: ctc:CTC01806 3.2e-183 5-methyltetrahydrofolate--homocysteine methyltransferase K00548; COG: COG1410 Methionine synthase I, cobalamin-binding domain; Psort location: Cytoplasmic, score:8.96.
  
 
 0.917
EDM98051.1
KEGG: mta:Moth_1307 1.8e-77 homoserine dehydrogenase K00003; COG: COG0460 Homoserine dehydrogenase; Psort location: Cytoplasmic, score:8.96.
 
 
 0.911
EDM97451.1
B12 binding domain protein; KEGG: jan:Jann_2550 1.5e-43 5-methyltetrahydrofolate--homocysteine S-methyltransferase K00548; COG: COG5012 Predicted cobalamin binding protein; Psort location: Cytoplasmic, score:8.96.
     
  0.872
cysK
KEGG: cch:Cag_1258 1.4e-102 cysteine synthase K/M/A K01738; COG: COG0031 Cysteine synthase.
 
 
 0.858
ilvA
KEGG: fnu:FN1411 7.5e-111 threonine dehydratase K01754; COG: COG1171 Threonine dehydratase; Psort location: Cytoplasmic, score:8.96.
  
 
  0.856
ahcY
Adenosylhomocysteinase; KEGG: mta:Moth_0706 2.5e-126 adenosylhomocysteinase K01251; COG: COG0499 S-adenosylhomocysteine hydrolase; Psort location: Cytoplasmic, score:8.96.
     
 0.846
EDM97787.1
Hypothetical protein; KEGG: sat:SYN_02703 2.7e-36 5-methyltetrahydrofolate--homocysteine methyltransferase K00548; COG: COG1410 Methionine synthase I, cobalamin-binding domain.
  
 
 0.843
rnfB
Putative ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
    
  0.827
EDN00590.1
KEGG: efa:EF2579 3.8e-148 diaminopropionate ammonia-lyase, putative; COG: COG1171 Threonine dehydratase.
   
 
  0.819
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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