STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM98401.14Fe-4S binding domain protein; KEGG: mth:MTH1553 3.2e-08 tungsten formylmethanofuran dehydrogenase, subunit H K00204; COG: COG1145 Ferredoxin. (387 aa)    
Predicted Functional Partners:
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
  
 0.997
EDM99350.1
4Fe-4S binding domain protein; KEGG: tte:TTE0893 3.2e-222 nuoF; NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit K00335; COG: COG1145 Ferredoxin; Psort location: Cytoplasmic, score:9.97.
 
 0.997
EDN00747.1
NAD dependent epimerase/dehydratase family protein; KEGG: sth:STH404 3.1e-18 putative NADH-ubiquinone oxidoreductase K00329:K00356; COG: COG0702 Predicted nucleoside-diphosphate-sugar epimerases; Psort location: Cytoplasmic, score:8.96.
   
 0.991
EDM97840.1
Hypothetical protein; KEGG: mma:MM1656 6.6e-80 oxidoreductase K00100; COG: COG0723 Rieske Fe-S protein.
  
 
 0.975
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 0.949
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.949
EDN01462.1
Hypothetical protein; KEGG: mth:MTH1548 3.9e-11 NADH dehydrogenase I chain E K00334; COG: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; Psort location: Cytoplasmic, score:8.96.
  
 0.941
nuoE
KEGG: chy:CHY_0731 1.0e-42 hydC; Fe-hydrogenase, gamma subunit K00334; COG: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; Psort location: Cytoplasmic, score:9.26.
  
 0.941
EDM99349.1
Hydrogenase, Fe-only; KEGG: tte:TTE0894 5.2e-183 nuoG; NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) K00336; COG: COG4624 Iron only hydrogenase large subunit, C-terminal domain.
  
 0.932
EDN00711.1
Oxidoreductase NAD-binding domain protein; KEGG: reh:H16_B1359 9.0e-28 paaE2; phenylacetic acid degradation protein E,flavodoxin reductase; COG: COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Psort location: Cytoplasmic, score:8.96.
  
 
 0.922
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.